Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942349.1_cds_XP_016485841.1_76730
CDS Infomation

[gene=LOC107806231] [db_xref=GeneID:107806231] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016485841.1] [location=join(9945..10832,12114..12734)] [gbkey=CDS]
Sequence

ATGATGTCCTTCGACTTGGTTTCCATTTTCATATTTGCATCTTTCCTCTTTCTATTAAAG
AAATGGATGAATTCCAAAAACCAAGCCAAAAGATTGCCTCCAGGTCCATGGAAACTACCT
ATTCTTGGAAGTATGCTTCATATGGTAGGTGGACTTCCACATCGTGTCCTAAGAGATTTA
GCTAAAAAATATGGACCACTTATGCACCTTCAACTAGGTGAAGTTTCTGTGGTTGTGGTT
ACTTCACCTGAGATAGCAAAAGAAGTACTAAAAACTCATGACCTTGCTTTTGCATCTAGG
CCAAAACTTTTGGCAGCAGAAATTGTCTTGTATGACTCTTCCGATGTTGCCTTTGCTCCC
TATGGCGATTACTGGAGACAAATGCGTAAAATTTGTGTCTTGGAAGTGCTCAGTACCAAA
AATGTTCGGTCATTCAGCTCGATTAGACGAGATGAAGTTGTTCGTCTTATTGAATTTTTT
CGATCATCTTCTGGTAAGCCAGTTAATTTTACAAAAAGGATCTCTCTATTCATGAGCTTT
ATCATCTGTCGATCGGCATTTGGGACAGTATTCAAGGAGCAAGATGAATTTATACAAGTA
ATGAAAGATGTTACAGCCTTGCTGGAAGGGTTTGATGTGGCTGACATATTTCCTTCACTA
AAGTTTCTTCATGTGCTCACTGGAATGAGGGCTAAAGCTATGAATCTCCACCATAAGGTA
GATGACATTGTTGATAATATCATAAATGAGCACAAAAAAAACCTTGCAACTGGCAAGTTC
AATGGTCAATTAGGAGGTGAAGATTTAATTGATGTACTACTAAGACTTAAGAAAGATGGA
GGCTTTCAATTTCCAATCACCAACGACAACATCAAAGCTATTATTTATGACATGTTTGCT
GCGGGAACAGAAACAACATCAACCACAATTGATTGGGCCATGGTGGAAATGATTAGGAAT
GCAAGTGTATTCGCCAAAGCTCAAGCAGAGGTAAGAGAAGTCTTTAACAGAAAAGAAACT
TTTGATGAAAATGATGTCGAAGAGTTGAAATACCTAAAATTAGTCATTAAAGAAACTTTA
AGACTCCATCCTCCGCTTCCACTTATGCTTCCAAGAGAATGTAGGGAAGAAACAAATATA
AATGGCTATACTATTCCTTTGAAATCGAAAGTAATGGTTAATGTTTGGGCTATCGGAAGA
GATCCAAAAAATTGGGATGATGCAGAAAGCTTTAAGCCTGAGAGATTTGAGCAGAGCTCT
GTAGATTTTGTTGGTAATAATTTTGAATATCTTCCCTTTGGTAGTGGCAGGAGAATTTGC
CCTGGAATATTATTTGGTTTAGCTAATATTTATTTACCACTAGCTCAATTATTGTATTAT
TTCGATTGGAAACTCCCTACTGGAATCAATCCAAGTGACCTAGACATGACTGAGTCGGAT
GGAGCAAGTTGTGCTAGAAAGAGTAACCTTTACTTGATAGCATCTCCGTATCAGCCTTCT
CAAGAGTGA

Peptide Sequence

PEP ID

XP_016485841.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MMSFDLVSIFIFASFLFLLKKWMNSKNQAKRLPPGPWKLPILGSMLHMVGGLPHRVLRDL
AKKYGPLMHLQLGEVSVVVVTSPEIAKEVLKTHDLAFASRPKLLAAEIVLYDSSDVAFAP
YGDYWRQMRKICVLEVLSTKNVRSFSSIRRDEVVRLIEFFRSSSGKPVNFTKRISLFMSF
IICRSAFGTVFKEQDEFIQVMKDVTALLEGFDVADIFPSLKFLHVLTGMRAKAMNLHHKV
DDIVDNIINEHKKNLATGKFNGQLGGEDLIDVLLRLKKDGGFQFPITNDNIKAIIYDMFA
AGTETTSTTIDWAMVEMIRNASVFAKAQAEVREVFNRKETFDENDVEELKYLKLVIKETL
RLHPPLPLMLPRECREETNINGYTIPLKSKVMVNVWAIGRDPKNWDDAESFKPERFEQSS
VDFVGNNFEYLPFGSGRRICPGILFGLANIYLPLAQLLYYFDWKLPTGINPSDLDMTESD
GASCARKSNLYLIASPYQPSQE

Transcript Sequence

Gene sequence data has not been registered.